rs32484558 SNP Detail

Summary

• ID
  rs32484558
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170977216 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTGCTTTGGG AATTTGCTTT TCAAATAATT TCCATGTGAG ACTGGCTAGA TCCAGGAAGA
  ACCCAAAGAT GAAGACTCTA CATACTAATC CCGAAACTCC TAAGATAAAT GCCTGGAACC
  AATATGATCA TTTTAAGCTA AATGTTAAAC CATTGACCTG ATATGCCCTA ACATTCACCA
  GCATGTGTTA CATCATAGAA TTTGAAAGCA TTTAATTATG GTCAAAATTA GGGATGAAAG
  ATACAGCTCT GGAAAACCTG GTCCTGTCCT TCGGCTATGA GGATGCGCAG CAAGATAAAA
  W
  TAAAGGATAA AGATAACCAA TCCAAACTCC CCAAGACTCA CTTTTACAAA GAAAGACTAA
  ACAGAATCCC TCTATTTTTA TACTGCATGA CAGAAGTGGA AAGAGAAATG AAAACATATT
  TGGGAGAATC GGGGTCTGGA ATCTCAACAG CACTGAAGCT AACTTTCCAT AACAAATAAT
  TTCCAAAAAT AGGACTGGCA CAAAACTGGG TTGGGATTTG TACCAGAAAT GTCACTAGCC
  CTTACAACTA TAAAGGCTCT GTGGATGATA GCTAATGAGT GAAGAATTCA GAACAAGGGG
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45152873	mCV24422433	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32484558					SNP	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170977216 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1011	CpG island 1011	680 bp proximal
Mpz	myelin protein zero	1066 bp upstream
Rr396555	regulatory region 396555	1004 bp upstream
Rr423226	regulatory region 423226	305 bp proximal
Rr423227	regulatory region 423227	934 bp proximal
Rr423228	regulatory region 423228	1077 bp proximal
Sdhc	succinate dehydrogenase complex, subunit C, integral membrane protein	within coordinates
Tssr14985	transcription start site region 14985	945 bp downstream