rs32485509 SNP Detail

Summary

• ID
  rs32485509
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:33701898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGACGTTCGT TTTGTACCAA GTCACTTATA AGTTTTGCAA
  AGGAAGAAAC TAGAACCTGA AGCTGTCATG TCTACCCTGC TTTTTTTATT TACATTATGC
  Y
  ACCTTGGACA TTTTCACACA GGGCCCATAG GTTCAAGTTT ACAAGATCAT ACATGTTTTC
  TTGGGACAGC ACCGTGCCTT TTGCAGACCT AGAAAAGCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47671990	NES11341757	PERLEGEN	MM_PANEL2	f	SNP		C	T	T	C	C	T	C	T	C
ss136275320	ENSMUSSNP2007411	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32485509					SNP	C	C	T	T	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47671990	NES11341757	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:33701898 () rs orientation: forward

Symbol	Name	Function Class
Gm67935	predicted gene, 67935	1599 bp downstream
Rr203577	regulatory region 203577	100 bp proximal