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rs32485513 SNP Detail
Summary
  • ID
    rs32485513
  • Variation Type
    SNP
  • Alleles
    A/C
Genome Location and Flanking Sequence
  • Location
    Chr9:33702571 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          ATCTG CTCTCTAGTC TCTATCACCA
    M
    GTTCATCACT TTCCTGGGAA CTGGT                                      
    
    M = A/C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
BTBR T<+> Itpr3/J
DBA/2J
KK/HlJ
LG/J
MOLF/EiJ
PWD/PhJ
SM/J
WSB/EiJ
ss47671994 NES11341718 PERLEGEN MM_PANEL2 f SNP A A C A A C
ss322894474 CHEV_9_33598860 CHEVERUD SCREENING_POP f SNP C A
SNP Consensus Information
SNP Consensus Type
BTBR T<+> Itpr3/J
DBA/2J
KK/HlJ
LG/J
MOLF/EiJ
PWD/PhJ
SM/J
WSB/EiJ
rs32485513 SNP A A C C A A A C
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss47671994 NES11341718 PERLEGEN MM_PANEL f SNP A/C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr9:33702571 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr203577 regulatory region 203577 323 bp distal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory