rs32485740 SNP Detail

Summary

• ID
  rs32485740
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:160021572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttgttggga tttgaactca ggacctctgg
  aagagcagcc ggtgctctta actgctgagc catccctcca gcccTAAAAC TCATTTCTTT
  TTTGTTTTGT TTTGttgttt ttttgagaca gggtttctct gtatagccct ggctgtcctg
  R
  aactcacttt gtagaccagg ctgtcctcga actcagaaat ccacctgcct ctgcctcccg
  agtgctggaa ttaaaggcga gtgccaccac gcccggcCCT AAAACTCATT TCTTACTCTA
  TAGCCTATAA ACATATCTTT CTGACTTTCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45153446	mCV23053374	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss145886063	ENSMUSSNP3803818	ENSEMBL	ENSEMBL_Sanger	f	SNP			G
ss320079175	CHEV_1_162124133	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32485740					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:160021572 () rs orientation: forward

Symbol	Name	Function Class
Cpgi916	CpG island 916	901 bp proximal
Mrps14	mitochondrial ribosomal protein S14	1213 bp upstream
Rr13519	regulatory region 13519	within coordinates
Rr28809	regulatory region 28809	428 bp proximal
Rr372319	regulatory region 372319	586 bp upstream
Tssr9641	transcription start site region 9641	1235 bp upstream