rs32490455 SNP Detail

Summary

• ID
  rs32490455
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:73603129 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGGATGCC AACATCACAC
  TTGGACTTTC CCATGGCCTT GACTGTGGGC CTCTGGTTCC TGGGTCTTGA AGGGTTGTTT
  ATTGCCTGCC TCCCTACCCC CACTTACAAT GGAAGTTCTG GACAGCTAGG GACGTGCGTT
  TGGGCATTGT GTGAATCTCT TAGTCCCATC TGCTGGCCCT GATCCCACGT TACCCCATTG
  M
  CACTGTCCTG GCTGCTGTAT GGGGGATGAG GACACAGGCT ATTGGCTTTG TTCTGCCTCC
  CAGGTTCCCT GGAAGCAGTC CTGGTCTGTA GTAGCTTCAT GGGAGTAGAA AAGTGGAAAA
  GGCATGGTCC TATACTGGAG AAACTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC
  TCTCTCTCAC ACACACACAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39410222	mCV23352533	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32490455					SNP	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:73603129 () rs orientation: forward

Symbol	Name	Function Class
Gm22106	predicted gene, 22106	1990 bp downstream
Ptp4a3	protein tyrosine phosphatase 4a3	within coordinates
Rr311850	regulatory region 311850	271 bp proximal
Rr369950	regulatory region 369950	1241 bp upstream