rs32492172 SNP Detail

Summary

• ID
  rs32492172
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85589918 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCA CAATGTGGAC TTAGACCTAA
  Y
  GGCTTCATTT TGACCCAGGA GTTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J	WSB/EiJ
ss39409719	mCV22747251	ABI	CRAMUS_MOUSE	f	SNP	T	T	T				C	T
ss51732921	NES14561443	PERLEGEN	MM_PANEL2	f	SNP			T	T	T	T			T	T		C	T		C
ss148271187	ENSMUSSNP2567163	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T					T
ss325042843	CHEV_15_85536147	CHEVERUD	SCREENING_POP	f	SNP											T			C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J	WSB/EiJ
rs32492172					SNP	T	T	T	T	T	T	C	T	T	T	T	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51732921	NES14561443	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85589918 () rs orientation: forward

Symbol	Name	Function Class
Lncppara	long noncoding RNA near Ppara	within coordinates
Mirc31	microRNA cluster 31, including Mirlet7c-2 through Mirlet7b	886 bp proximal
Mirlet7b	microRNA let7b	1602 bp upstream
Mirlet7c-2	microRNA let7c-2	886 bp upstream
Rr507291	regulatory region 507291	1858 bp distal
Rr507292	regulatory region 507292	within coordinates
Rr507293	regulatory region 507293	1424 bp proximal
Tssr135762	transcription start site region 135762	1733 bp upstream