rs32494025 SNP Detail

Summary

• ID
  rs32494025
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156135106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACTC AGCCAAGCTG CCCAGTCCTC
  Y
  CTCCTGTTTA TCTACTTCCG GAAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45655034	mCV24978732	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss148125026	ENSMUSSNP5201870	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32494025					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156135106 () rs orientation: forward

Symbol	Name	Function Class
Rr93557	regulatory region 93557	within coordinates
Rr97568	regulatory region 97568	1108 bp proximal
Rr106662	regulatory region 106662	386 bp distal
Tssr45000	transcription start site region 45000	176 bp upstream
Tssr45001	transcription start site region 45001	143 bp upstream
Tssr45002	transcription start site region 45002	84 bp downstream
Tssr45003	transcription start site region 45003	113 bp downstream
Tssr45004	transcription start site region 45004	136 bp downstream
Ttll10	tubulin tyrosine ligase-like family, member 10	within coordinates