rs32494127 SNP Detail

Summary

• ID
  rs32494127
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:181056956 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AAAAAAAGAG TTGTTCAGTC AAGCTCGATA GTGATTAAGG GTTGGAAGGA ATTTTGGACT
  TGTAAACTTT TGAGACAAAG CAGTTGAGGT ACAAAACAAT GATGTGTCTT GCTCAGGGGA
  AGCGTGGGCT GATATCAGAG CTGGATCTAC CAGTCTTCGG CTCTTAGTTT CCAGGGTGGT
  GGTTCTGTTT CCACTCATGC TGCTGCCAGC CCATAAAGAC ACATAACAAA TAGTGGCCAG
  ATTAAAACAG CCAGAGTCCA CATGTAGACA CTTACAGGCG TGTGTGTGTG TGTGTGTGTG
  W
  GAGAGAGAGA GAGAGAGTGT GTGTTTGTGT ATGTGTGTGT GCATGTGAGT GTGTGTGTGT
  GTATGTGAGT GCGTGTGAGT GTGTGTGTAT GTGAGTGTGA GTGAGTGTGT GTGTGGTCAA
  ACTTACAACC TCAACACTTG GAAGATGGAT AATGGAGGAT AAAGAGTTCA AGGTTATTCT
  TGGCTGTGTA GTGAGTTTGA GGCTAACTTG GGCTACTTGA GACTGTCTCT CTCCATCAAA
  AAAAAAAAAA AAAGAATTTG GATTTCTGGG TTTTCTCTTC AAAGACTTGA GTACAAGTTT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45154999	mCV23624480	ABI	CRAMUS_MOUSE	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs32494127					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181056956 () rs orientation: forward

Symbol	Name	Function Class
A430110L20Rik	RIKEN cDNA A430110L20 gene	893 bp downstream
Gm38664	predicted gene, 38664	Intron
Gm57146	predicted gene, 57146	within coordinates
Rr424701	regulatory region 424701	1148 bp distal
Rr424702	regulatory region 424702	1131 bp proximal