rs32496340 SNP Detail

Summary

• ID
  rs32496340
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129470142 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTAT GGGCTTCAGG ACAGTCGGAG
  Y
  TACCTAGTGA GACCCTGCAT CAGGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45655309	mCV24828935	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss321313992	CHEV_4_129253593	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32496340					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129470142 () rs orientation: forward

Symbol	Name	Function Class
Fam167b	family with sequence similarity 167, member B	466 bp downstream
Gm68905	predicted gene, 68905	956 bp upstream
Rr367705	regulatory region 367705	864 bp downstream
Rr600278	regulatory region 600278	967 bp distal
Rr600279	regulatory region 600279	503 bp distal
Rr600280	regulatory region 600280	390 bp distal
Rr600281	regulatory region 600281	712 bp proximal
Rr600282	regulatory region 600282	949 bp proximal
Tssr39178	transcription start site region 39178	698 bp downstream
Tssr43528	transcription start site region 43528	1148 bp upstream
Tssr43529	transcription start site region 43529	1052 bp upstream
Tssr43530	transcription start site region 43530	997 bp upstream
Tssr43531	transcription start site region 43531	948 bp upstream