rs32497555 SNP Detail

Summary

• ID
  rs32497555
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126219386 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAAAGT GAGTTTCTCA
  ATTCTCTGCA AGAGGCTGGG AATCCTTTCA GCTACGGAAA TCTGAGAAGT TTCTGGAAGG
  CCCTGAAGGG AAAGATTCTG TCAGTGATTT CTCTAGTTCT ACTAAGGAAT CCCCGAAACT
  GAGAGAATCA GACATTATAT GCACGAGATG AAAACGGGGT GGAAAAGAGG GACATTCTGC
  Y
  CAGGGTCCTT CCTGATCTGA GATCTCCGAG GTTCTAAGAA TTGCTGTAAC AGTTCCTGGC
  ACAGAGGCTG TGCCAGAGAC AGGTGAGGCA GAGGGCTGTC AATCAAAGGT TAAGAGTAAG
  TGGTGGCGTG TTCATCTCCT AAGAAGCAGG TGCTCAAGGG TCCAGCAGCT AGGACTGGCC
  ATTGACACTG AGGACGGGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46152440	mCV22749707	ABI	CRAMUS_MOUSE	f	SNP		T					C		C
ss47255807	NES11555342	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	C	C	C		T	C	C	C	T	C	C	T	C
ss145875026	ENSMUSSNP5543758	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32497555					SNP	C	T	C	C	C	C	C	T	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47255807	NES11555342	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126219386 () rs orientation: forward

Symbol	Name	Function Class
Gm39086	predicted gene, 39086	1733 bp upstream
Gm39087	predicted gene, 39087	1485 bp upstream
Rr655535	regulatory region 655535	355 bp distal
Rr655536	regulatory region 655536	1246 bp proximal
Rr655537	regulatory region 655537	1679 bp proximal