rs32498077 SNP Detail

Summary

• ID
  rs32498077
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16350309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTG TGGGTGATAT TCCTGGAGTC
  Y
  GCTTTAAGGT GGTTAAGGCA GCCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46152656	mCV23537693	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss148390873	ENSMUSSNP2246452	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
ss322111629	CHEV_7_17201733	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32498077					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16350309 () rs orientation: forward

Symbol	Name	Function Class
Arhgap35	Rho GTPase activating protein 35	996 bp upstream
Cpgi18383	CpG island 18383	602 bp distal
Gm29443	predicted gene 29443	within coordinates
Gm44589	predicted gene 44589	within coordinates
Rr400125	regulatory region 400125	708 bp downstream
Rr642707	regulatory region 642707	1402 bp distal
Rr642708	regulatory region 642708	901 bp distal
Rr642709	regulatory region 642709	1275 bp distal
Rr642710	regulatory region 642710	752 bp proximal
Rr642711	regulatory region 642711	860 bp proximal
Rr642712	regulatory region 642712	1940 bp proximal
Tssr64615	transcription start site region 64615	764 bp downstream
Tssr70753	transcription start site region 70753	1778 bp upstream
Tssr70754	transcription start site region 70754	1761 bp upstream
Tssr70755	transcription start site region 70755	1673 bp upstream
Tssr70756	transcription start site region 70756	1596 bp upstream
Tssr70757	transcription start site region 70757	1579 bp upstream
Tssr70758	transcription start site region 70758	1524 bp upstream
Tssr70759	transcription start site region 70759	1493 bp upstream
Tssr70760	transcription start site region 70760	1363 bp upstream
Tssr70761	transcription start site region 70761	1317 bp upstream
Tssr70762	transcription start site region 70762	1246 bp upstream
Tssr70763	transcription start site region 70763	1108 bp upstream