rs32498805 SNP Detail

Summary

• ID
  rs32498805
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:66900643 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTA AGCATTTTAA AGTATATATT
  Y
  GTCCTCCGTG TAAAAGCAAC GCTGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45155110	mCV23098086	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss144520286	ENSMUSSNP4474392	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss319758723	CHEV_1_66908058	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32498805					SNP	C	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:66900643 () rs orientation: forward

Symbol	Name	Function Class
Acadl	acyl-Coenzyme A dehydrogenase, long-chain	within coordinates
Cpgi339	CpG island 339	1217 bp proximal
Rr412477	regulatory region 412477	330 bp proximal
Rr412478	regulatory region 412478	766 bp proximal
Rr412479	regulatory region 412479	1783 bp proximal
Tssr12011	transcription start site region 12011	1770 bp downstream
Tssr12012	transcription start site region 12012	1781 bp downstream
Tssr12013	transcription start site region 12013	1811 bp downstream
Tssr12014	transcription start site region 12014	1816 bp downstream
Tssr12015	transcription start site region 12015	1833 bp downstream
Tssr12016	transcription start site region 12016	1857 bp downstream