rs32499311 SNP Detail

Summary

• ID
  rs32499311
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:117840451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAGATAAAT AAAAGATTTT TTTTAATATT TGAATAAACT
  ATAGTCTCTA TGTAAGTACA TAGAGAAAAT ATTTGGAAAA AGCACTTGGC CAAGGTGTGT
  K
  TGGGGGGGGG GGTGTCTCCA TTCTATCATT AGCTATTCAT CTTTCTGAGA GAGAATGACT
  TCAACTTTTA CTATGAAAAT TATGACCTAC AAACTTGAG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46152569	mCV24813635	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32499311					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:117840451 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19616	CpG island 19616	1660 bp proximal
Rr654423	regulatory region 654423	1449 bp proximal
Smg1	SMG1 nonsense mediated mRNA decay associated PI3K related kinase	within coordinates