rs32499372 SNP Detail

Summary

• ID
  rs32499372
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:34464464 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATCATTTA CAGACTGAAA
  AACATTTAGT ACTGCTGTGA ATTCTGCCAG CTGAGCAGAA AGTCCAGGGG TCTCTATGAC
  TACCTGTTGA CTATTTATAA AATATCCTGT GTGTCTTTTA GAGGAGCCAT CAGTAAATAT
  TAAAAAAAAG CATTATGTAG AGGTTGTAAA GATGTTTTAT GAGGAAATAT AACCTTATGT
  R
  CATTTAAAAT TTTTATCAGC CTATCTTGAG GATGACTATC TATAATGCCA TCAAATCCTA
  TTTGAGCAAG CAACCAATCT GTACTATGCT GCTTTAACCA ACTATTTTGA TCCACATTAA
  AAGGCTGAAT AATGATATCT TGTTTTTTTT CCAAAATAAA TCAGTGCCTG CTTTCTTCCA
  AGCATCATCA TATGAGCCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45155417	mCV24132663	ABI	CRAMUS_MOUSE	f	SNP		A	G				G		G
ss51237534	NES14285932	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G		A	G	G	G	G	G	G	G	A
ss148888438	ENSMUSSNP5818178	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32499372					SNP	A	A	G	G	G	G	G	A	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51237534	NES14285932	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:34464464 () rs orientation: forward

Symbol	Name	Function Class
Gm37233	predicted gene, 37233	635 bp downstream