rs32500036 SNP Detail

Summary

• ID
  rs32500036
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:134485017 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTCT TGACTAGGTT GGCAACCGCC
  K
  ACTCCCTCAG CGTCTCTCTG GGTTG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45155125	mCV23638938	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss145508308	ENSMUSSNP2013722	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss319983161	CHEV_1_136453856	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32500036					SNP	T	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:134485017 () rs orientation: forward

Symbol	Name	Function Class
Cpgi772	CpG island 772	219 bp distal
Gm57134	predicted gene, 57134	177 bp upstream
Rr367005	regulatory region 367005	19 bp downstream
Rr418945	regulatory region 418945	188 bp distal
Rr418946	regulatory region 418946	1288 bp distal
Rr418947	regulatory region 418947	845 bp distal
Rr418948	regulatory region 418948	within coordinates
Tssr13798	transcription start site region 13798	277 bp upstream