rs32500583 SNP Detail

Summary

• ID
  rs32500583
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:77725694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAATTACTC ACACTGAGAA
  TACCCCATGG TTGCAATCAT GCCTGATGCC ACAGGTCACC TTGGAAGGTC TTTCTCTCTC
  ATTTCTGGCT TTTATTCATG AATGAAAAGG AAAATATCTT TTATTTTATT AATTCTGGAC
  TCGTAGCTCC TGGTTGAACC TACTCCTTTT CATATACATG TATTAGTCAG TTTTGTATCT
  Y
  TATAGAAGAT GCTTTAGGTA AGAAAATTAG TTACTTTTCT ATGCTATGAT AAAACTCCAC
  GACCAAAGCA AACTCAGGAA AGAAAGATTT TAGCTTGGCT TATGGTTCCA ATAGAGTGTT
  TATAATGGTA GAGGAGGCAG AGCAGCAGGT GGAACAAGAA GCTGAGAGAT CACATCTTCA
  GCCACAAGCA GGAAGTAGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47173868	NES11228597	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32500583					SNP	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47173868	NES11228597	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:77725694 () rs orientation: forward

Symbol	Name	Function Class
4930458K08Rik	RIKEN cDNA 4930458K08 gene	1668 bp upstream
Rr468393	regulatory region 468393	495 bp distal