rs32500881 SNP Detail

Summary

• ID
  rs32500881
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44838745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACCCAGAC AGACGGATGG
  ACTCGGCCCA GGGGAGACAG TTGCCCCCAG AGAGGTGAGT GCTATGGGAA AAATGTCCAC
  ACAAAACAGA GCCAGTAGAG GTCAGGGATG CAGAGTGAGG AGGGAAGGGG CAGAGAGATG
  CAGTGCTTAG CAGGGAGGAA AGCCAGCTGC AAAGAACCCA TAGAGACGGG CAGAAGGGGC
  R
  CCATGGGCTC AGGTACTACC TGGGTGGTAG TTCTGTACTC CTCCAAGGTC CGGGCCAGAC
  TCTCTGCATG GCGGGTACGC TGGGGTACGG AACACAAAGC TACCTGAGGC AGGGCTCAGT
  TCCCCAAGAC ATGAGGCTGC TGAAGGGGGG CTGGCTGAGC TGGGACAGCC TGCAGGCCAC
  ACTGTAACCT GGGAGAATCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46152881	mCV27567945	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32500881					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44838745 () rs orientation: forward

Symbol	Name	Function Class
Gm31097	predicted gene, 31097	within coordinates
Kash5	KASH domain containing 5	within coordinates
Tssr72334	transcription start site region 72334	608 bp upstream
Tssr72335	transcription start site region 72335	233 bp downstream
Tssr72336	transcription start site region 72336	326 bp downstream
Tssr72337	transcription start site region 72337	350 bp downstream
Tssr72338	transcription start site region 72338	473 bp downstream