rs32501984 SNP Detail

Summary

• ID
  rs32501984
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:154934017 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCAGCTCA TGTTCAGCAG CTTTTCTTAT ACTTCCCAGG
  ACCGCCTGCC TGCCCAGGGG TGGCTGTAGT GACCCATGGC CGGCTGAGCT CCCCCACATT
  R
  ATAAAGAAAA TGAGACTTGC CCACAGGCCA ATCTGATGGA GTCACTTTTT CTATTGAAGG
  TCCCTCTTCC CAGATTACCC TAGTTTGTGT CAAATGGAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45155441	mCV24610711	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss145774502	ENSMUSSNP5237376	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32501984					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:154934017 () rs orientation: forward

Symbol	Name	Function Class
Cpgi880	CpG island 880	1391 bp proximal
Gm29282	predicted gene 29282	1092 bp upstream
Gm41980	predicted gene, 41980	within coordinates
Gm51651	predicted gene, 51651	within coordinates
Gm70900	predicted gene, 70900	726 bp downstream
Rr372279	regulatory region 372279	974 bp downstream
Rr396410	regulatory region 396410	1287 bp upstream
Tssr248	transcription start site region 248	1252 bp downstream
Tssr9521	transcription start site region 9521	1415 bp upstream
Tssr9522	transcription start site region 9522	1673 bp upstream
Tssr14331	transcription start site region 14331	1263 bp downstream
Tssr14332	transcription start site region 14332	1277 bp downstream
Tssr14333	transcription start site region 14333	1287 bp downstream