rs32503190 SNP Detail

Summary

• ID
  rs32503190
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:132591546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGTTTGAAG CCAGTTTGAG CATATACTGT CTCAACCAAA
  AAAAAAAAAA AAAAAAAAAA ATCAGACCAA CCTGAACAGC TCCTCACCCT AACACCTTGG
  R
  AAAAGTGATT TACCTTGGGG ATTTTAGGCA TTGAAAATAG AATACAGAAG ACGTTAAAAT
  GGCTGATTTT CTTTTAAGGG CCAAGGTTAT ATCAACTAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46153166	mCV24306371	ABI	CRAMUS_MOUSE	f	SNP	G						A		G
ss47272429	NES11563783	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G	A	G		A	G	A	A		A		A	G	A		A
ss145938210	ENSMUSSNP804307	ENSEMBL	ENSEMBL_Sanger	f	SNP														A
ss322452977	CHEV_7_140181500	CHEVERUD	SCREENING_POP	f	SNP												G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32503190					SNP	G	A	G	G	A	G	A	A	G	A	A	G	A	A	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47272429	NES11563783	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:132591546 () rs orientation: forward

Symbol	Name	Function Class
Ctbp2	C-terminal binding protein 2	within coordinates
Rr154153	regulatory region 154153	55 bp proximal
Rr163833	regulatory region 163833	1482 bp distal
Tssr75237	transcription start site region 75237	1559 bp upstream
Tssr75238	transcription start site region 75238	63 bp upstream
Tssr75239	transcription start site region 75239	1839 bp downstream