rs32503978 SNP Detail

Summary

• ID
  rs32503978
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:127575331 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTAGAAAC AAAAAATACT
  GCAAAAGTGG AGAGTGATGG GAGGGGCTGT ATAAATGCTA GAAACCCTGG ATCTGGAAGT
  TTAGACTTCA GATTCTGGTA TTTATTATTT CTAGTACGTC GTGGGTCTTG CTTGGGAGCT
  GTTCTTTTAA AGTTGATGGT GTTTTAAAGT CCAAAAATTA CTAAACCAGA CAATTTTTTA
  Y
  TTATTTTTTT GGATTTTTGA GATGGATTTC TCTGTATGAC TCAGAAATCC ACCTGCCTCT
  GCCTCCCAAG TGCTGGGATT AAAGGCGTGC GCCACCACAC CCGGACAGAC ATGATGTTTC
  GTACCTTTAT TCCTAACAGG ATGATCTCTT GAGTTCATGT CTAGGCCATC CTGCTCTACA
  GAGCTAGTTC CACGACAGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss46153611	mCV23385156	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss145883412	ENSMUSSNP5148549	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs32503978					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127575331 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fus	fused in sarcoma			Intron
				Noncoding-Transcript-Variant
Tssr69330	transcription start site region 69330			1752 bp downstream