rs32508854 SNP Detail

Summary

• ID
  rs32508854
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:6004865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTCAGAAA TACTTTTGAA
  GTTAAAAATA TGACGCATCT ATCTCTTTAA AAAACATCAC ACACAAACTC ACACACACTC
  AAACACAAAT ACACACACAC ACACACACAC TAGTTTATCT ACAATCTGTG CTGCCCTAAT
  CTATCTAAAC TTTGTTTGCA TCAAACCAGT TACTTTTACG CGTCAAGGAA ATGCAAATAA
  Y
  GGAAGTTACA GTCACTCCCC TAACACGTCG GTGCATTCGG TTTCAGTTTA AGAACTGTGG
  GTTTGCACTG ATTCTCGCCG CTCTAATCTC AGCCCATGTA CTGTGGGCAT CTCGCATTCA
  CAAGCAGCAC ACATTGGCAG TTCTCGCTGA TAACTTGGAG CGGATTCCCT ACAGATGAGT
  TCTTTGAATA TCCAAGGCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321730885	CHEV_6_5954865	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32508854					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6004865 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17134	CpG island 17134	795 bp proximal
Dync1i1	dynein cytoplasmic 1 intermediate chain 1	Intron
Rr407096	regulatory region 407096	1130 bp proximal
Rr626192	regulatory region 626192	within coordinates
Rr626193	regulatory region 626193	953 bp proximal