rs32508859 SNP Detail

Summary

• ID
  rs32508859
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:6005574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTGGTGT ACTTTCAAAC
  TTGCCTCTGA CTTCTGTGCT ATTTTGATGT GACAATATTC GCTGGAAATC AAGTGTGCCA
  TTTTAATTTA TTATATCCCT CTGGAGTGGA GGCATTTGTA TGCAGTGGAA AAATGCTCTG
  TGTTTCCCCT CAGAACATCA ACTGTAGGGG TCTTGGAAAT CCTTGGTGAT TTAGAAAGGA
  W
  GTCATATTTT CTGTGTAAGT TCAGAGGTTC TAGAATGAGC CACATTGCTC CACTTGGTTC
  TGGCGAACTA ACCCCATACA GGGAGGCTAA GGTCTTGAGT GGAGAGATTT CCACTTTTCT
  GTAAGAGCGC AAACCCGCAT TTAAAGGTAT TTGTCTCCTT CCCTCGCCGC ACAAAAAGAG
  TTAAAATATG AATTTGGCCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321730891	CHEV_6_5955574	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32508859					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6005574 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17134	CpG island 17134	86 bp proximal
Dync1i1	dynein cytoplasmic 1 intermediate chain 1	Intron
Rr407096	regulatory region 407096	421 bp proximal
Rr626192	regulatory region 626192	within coordinates
Rr626193	regulatory region 626193	244 bp proximal