rs32509590 SNP Detail

Summary

• ID
  rs32509590
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:6007022 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAACGCTGG CTATTTGTAC
  AATTTCTGTT TCGACTCCAT TGAAGATGGT TCTCTACACT GCTTTCTGTT TAGTTCTACC
  ATCCATTTGA TTTATTGCTA TGGAAATATT CCTTGTCTAC AATATTGAAC TCAAAGGCCA
  TAGTGTCTAA GTTTATACAT GTATGCAAAA CTCAATTCGT CTTTAAAATG GGATTTTAAC
  R
  TGTCACATTT AAAGTCATTC ACAAGATAAA ATAGGCATCT ATTTAAAAAA AAAACAGTTG
  ATAACAAAAT GAATATTTTT GAGGATGTCA TCTGCTTTGT TCCTCTTCTT TCAATCCCTC
  AAAAGTATCG AGGGCCTAAC TCAGGGCCTT GGGAATGATG TTGTTGCCAG GGACCGTGTT
  ACATGACTAT TTTATGTCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321730895	CHEV_6_5957022	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32509590					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6007022 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17134	CpG island 17134	564 bp distal
Dync1i1	dynein cytoplasmic 1 intermediate chain 1	Intron
Rr407096	regulatory region 407096	413 bp distal
Rr626192	regulatory region 626192	338 bp distal
Rr626193	regulatory region 626193	1183 bp distal