rs32512933 SNP Detail

Summary

• ID
  rs32512933
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:191451134 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCG GCGGGTCCTG GTCCGGGTCC
  R
  GGTCCGGGGC AGCGTGCGGA GACCG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45156723	mCV25305134	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss146510362	ENSMUSSNP2141530	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss320195988	CHEV_1_193542901	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32512933					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191451134 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1225	CpG island 1225	within coordinates
Lpgat1	lysophosphatidylglycerol acyltransferase 1	Intron
Rr426207	regulatory region 426207	1178 bp distal
Rr426208	regulatory region 426208	623 bp distal
Rr426209	regulatory region 426209	1022 bp distal
Rr426210	regulatory region 426210	217 bp distal
Tssr10776	transcription start site region 10776	1118 bp downstream
Tssr10777	transcription start site region 10777	992 bp downstream
Tssr10778	transcription start site region 10778	961 bp downstream
Tssr10779	transcription start site region 10779	932 bp downstream
Tssr10780	transcription start site region 10780	709 bp downstream
Tssr10781	transcription start site region 10781	628 bp downstream
Tssr10782	transcription start site region 10782	591 bp downstream
Tssr10783	transcription start site region 10783	142 bp upstream