rs32513379 SNP Detail

Summary

• ID
  rs32513379
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:101455738 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTGCTAGG ATGTTATGTC ATGTGCATAG ACCTCAAAAC
  TCACAAGTTT AAAAAGTATA ACAGCACACC TAGGTTTCCT TTTGTAGTAC TAGTGTCTAA
  W
  AGCTATTACA GAGTTCAGGT TCAATGAGTA GACCCAAACA TGAAAGTCAG TTACAGAACT
  AAATACTCCT TTGATATCCA GAATTCATTG TTCAGTGTG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45156549	mCV24336872	ABI	CRAMUS_MOUSE	f	SNP		A	T					T		A
ss49451065	NES12810161	PERLEGEN	MM_PANEL2	f	SNP	A		T	T	T	T	T		T	A	T	T	T	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32513379					SNP	A	A	T	T	T	T	T	T	T	A	T	T	T	A	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49451065	NES12810161	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:101455738 () rs orientation: forward

Symbol	Name	Function Class
Gm57575	predicted gene, 57575	within coordinates
Gm70454	predicted gene, 70454	within coordinates