rs32514480 SNP Detail

Summary

• ID
  rs32514480
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:9619726 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCTGAGCCA TAAAGAGAAA CAAATGAAAA
  GGAGAAACTG AAGCCAGAGG AAGGGACTGC CCAAAAAATA GCCAATGTGG CAGGGAAGGG
  AGGGAAGTTT CCAGAAAAAA AAAAGCAAAA CCGTGCGATG TACATAGGTG ACAGAATCCA
  R
  GAAGGAGATT GTGTGAGGTG TTCCTGCTGT AGAGACAGGA CCAGCGCTGG GGCTACAGTT
  GGTAGAGGAG GAATGGTGGG ATGTGAGTAG CTGACCTGGA AGGCCAGTGC TCAAGTGCAG
  AAGCAATCTG AAGATAAACC TTGAAGATGG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45156741	mCV24092630	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148565844	ENSMUSSNP123857	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss319630709	CHEV_1_9539582	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32514480					SNP	A	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:9619726 () rs orientation: forward

Symbol	Name	Function Class
Adhfe1	alcohol dehydrogenase, iron containing, 1	Intron
Rr407602	regulatory region 407602	1543 bp distal
Rr407603	regulatory region 407603	196 bp distal
Rr407604	regulatory region 407604	314 bp distal
Rr407605	regulatory region 407605	1015 bp proximal
Tssr5898	transcription start site region 5898	1400 bp downstream
Tssr5899	transcription start site region 5899	1376 bp downstream