rs32514520 SNP Detail

Summary

• ID
  rs32514520
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30731749 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAATTGCCT GCTAGAGCCC ATCCCTCCTC CCAGGCCCTC
  TCTGCTCAGA GCCCATCCCC GAGCCCCACA GCCTCCCTGG TGGACATGCC CTAAGCAAGC
  M
  GTCCTCCTGA AGCCCAACTT GTGGGTTGTT GCAGGAGACA GAGCTTGAGA GTGTGGGCTG
  CATTTTCACA GCTATGCATG AGGTATCCTG AGGGGCAGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss46154534	mCV22838247	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
ss148696750	ENSMUSSNP7154116	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C
ss322138562	CHEV_7_31817343	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs32514520					SNP	A	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30731749 () rs orientation: forward

Symbol	Name	Function Class
Fxyd5	FXYD domain-containing ion transport regulator 5	404 bp downstream
Rr644976	regulatory region 644976	1386 bp distal
Rr644977	regulatory region 644977	184 bp distal
Rr644978	regulatory region 644978	1169 bp proximal
Tssr65829	transcription start site region 65829	529 bp upstream