rs32514849 SNP Detail

Summary

• ID
  rs32514849
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44465149 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTTCTAG CCGTGCCCCT
  TCCGCATCAT TAGACTATAC CCCCTTTAAT CCACAGGGGT TCCCAGAATA ATTCTGCATG
  CCTGGGCCCT TCATCAGTGT CACACACACA GATCCCGCTC TTCCCTTAAA AATTTTGGTG
  ACTTCTAAAG ATTCTACGGG AAGCTCCGCC CACCCTTCTG TCTGTCACAG TCAGTTCCCG
  Y
  CCCCCACTAG CAAGTCCCTA GAGGCCCCGC CCCTGTAGTG CTAGTGCTAA CTCTTTCTTA
  AAGGTGTTCC TAAAGCCTTT CCTGTCAGTT TAAGCCAGTC CCCGCCCCAG CAGGTGTCTG
  ATTGGAGGGA AGTTGGGCCT GAGTCGGAGC CTCAAGCAAA ACCCCACCCT TCCTCGCTGC
  TGGCTCGACT AGCGACGAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46154990	mCV27573930	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss149123018	ENSMUSSNP4284915	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32514849					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44465149 () rs orientation: forward

Symbol	Name	Function Class
Atf5	activating transcription factor 5	within coordinates
Cpgi18994	CpG island 18994	24 bp proximal
Il4i1b	interleukin 4 induced 1B	645 bp upstream
Nup62	nucleoporin 62	363 bp upstream
Rr400297	regulatory region 400297	47 bp upstream
Rr646219	regulatory region 646219	within coordinates
Rr646220	regulatory region 646220	682 bp proximal
Rr646221	regulatory region 646221	839 bp proximal
Tssr66426	transcription start site region 66426	204 bp upstream
Tssr66427	transcription start site region 66427	565 bp upstream
Tssr66428	transcription start site region 66428	598 bp upstream
Tssr66429	transcription start site region 66429	639 bp upstream
Tssr66430	transcription start site region 66430	661 bp upstream
Tssr72230	transcription start site region 72230	68 bp upstream
Tssr72231	transcription start site region 72231	43 bp upstream
Tssr72232	transcription start site region 72232	184 bp downstream
Tssr72233	transcription start site region 72233	861 bp downstream
Tssr72234	transcription start site region 72234	1229 bp downstream