rs32516422 SNP Detail

Summary

• ID
  rs32516422
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:14516506 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCGCCAAA GGTTTTGTTC
  CAGGAGGGTT TCAGATGCTG TGTGCCCGCA GTGAACTAGG AAGTGAAGAA CGATTATGGG
  CTGGAAATAA GCATACATTC ATCCAACAGA ATTTTTGCTC ACTTAGTCAG ATGTTAGAAC
  ATTTTCTGAA AGACTAAATT TGTTTTGATC TGACATCAAA AACTATTTCA TACACATTAG
  Y
  CCCACAAAAA CGCTTGAGAA ACATTTATCA CGTGCTAGAC ATCAGGAAGT GAAAACAAAG
  CGGCTCTGTA TCATAGCTCA GTGTCTCTAC CAGCGGGGCC TCGGCAATGC AGTTGCCTAT
  CAAAAATACC GTGTGTGTTG TTTCTTTTCT TGGCTATTGG TAAGGACAGT GCATATTTTT
  CAGTGTTTAT TCCATACCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss45657744	mCV22942726	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss146043050	ENSMUSSNP4057159	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs32516422					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:14516506 () rs orientation: forward

Symbol	Name	Function Class
Slc26a7	solute carrier family 26, member 7	within coordinates
Tssr40956	transcription start site region 40956	128 bp upstream