rs32518907 SNP Detail

Summary

• ID
  rs32518907
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:89719163 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAACA GGACAAAGAA AGAGTAAGAT
  R
  GCATGCATAG CTGGCTGGGG ATGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46154876	mCV22978830	ABI	CRAMUS_MOUSE	f	SNP		G						A
ss61031869	NES16094512	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	A	A	A	A	G	A		G	G	A		A
ss145292113	ENSMUSSNP2114385	ENSEMBL	ENSEMBL_Sanger	f	SNP		G						A
ss322314081	CHEV_7_97218465	CHEVERUD	SCREENING_POP	f	SNP											G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32518907					SNP	A	G	G	G	A	A	A	A	G	A	G	G	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61031869	NES16094512	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:89719163 () rs orientation: forward

Symbol	Name	Function Class
Tssr2327	transcription start site region 2327	1705 bp upstream
Tssr73516	transcription start site region 73516	1956 bp upstream
Tssr73517	transcription start site region 73517	1928 bp upstream
Tssr73518	transcription start site region 73518	1891 bp upstream