rs32518913 SNP Detail

Summary

• ID
  rs32518913
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30827556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTA TATGATTTGT CTGTTTGTTG
  Y
  GTGTACCTCA CCCCCTGGGT GAGGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46154882	mCV24561305	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss148700247	ENSMUSSNP2348707	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss322139536	CHEV_7_31913150	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32518913					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30827556 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18837	CpG island 18837	486 bp distal
Gramd1a	GRAM domain containing 1A	1996 bp downstream
Rr645025	regulatory region 645025	1298 bp distal
Rr645026	regulatory region 645026	638 bp distal
Rr645027	regulatory region 645027	363 bp proximal
Scn1b	sodium channel, voltage-gated, type I, beta	1128 bp upstream
Tssr71935	transcription start site region 71935	1406 bp upstream
Tssr71936	transcription start site region 71936	1359 bp upstream
Tssr71937	transcription start site region 71937	1197 bp upstream
Tssr71938	transcription start site region 71938	1139 bp upstream
Tssr71939	transcription start site region 71939	1089 bp upstream
Tssr71940	transcription start site region 71940	954 bp upstream