rs32519385 SNP Detail

Summary

• ID
  rs32519385
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:109077713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCCACTCA TTTTTATTAT
  TTCAGTTATA CAACTAGTTT ATATTTGATG TTTTTATAAA AAACAATATA GAACTTCTAA
  TCTCTTTTCT GTCACAACAT TTGGGTCCTT ATCTTACACT GCTTTCAGGT CAAGATACAT
  TCATATTTCA AAATGATAGT TATAAACATT TGTATGCTAT TTTTTAACTA TATCATAGAA
  M
  GAATTTGGGA TTTTCCCTGT ATTCTTTTTT TTTATGGTTA GCTCATCATC AGTGAATATG
  GGGTAAATGA AGAGATAGAT TGGATCTAGG CAACACAGTT AGAAATATGA AAAGGAAATC
  AGTTTGAATT GCAAAGTCAA GGATGTATGC TTCTAACAAT ATTCCAAAGT ATATAAGTGC
  ACAGGAATTG TGCTAAGCAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss49363564	NES12545246	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A	A	A	A		C	A	A		A
ss146796923	ENSMUSSNP2950091	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A					A
ss324806632	CHEV_14_109239498	CHEVERUD	SCREENING_POP	f	SNP											A				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32519385					SNP	A	A	A	A	A	A	A	A	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49363564	NES12545246	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:109077713 () rs orientation: forward

Symbol	Name	Function Class
Tssr130175	transcription start site region 130175	1750 bp downstream