rs32519538 SNP Detail

Summary

• ID
  rs32519538
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:85590166 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAG CCTCAGTTTC TTCAGCGATC
  Y
  CTGCTGGCCT CTGGAAGTGC TAGTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39413635	mCV22747060	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
ss148271208	ENSMUSSNP7080947	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss325042846	CHEV_15_85536395	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32519538					SNP	C	C	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:85590166 () rs orientation: forward

Symbol	Name	Function Class
Lncppara	long noncoding RNA near Ppara	within coordinates
Mirc31	microRNA cluster 31, including Mirlet7c-2 through Mirlet7b	638 bp proximal
Mirlet7b	microRNA let7b	1354 bp upstream
Mirlet7c-2	microRNA let7c-2	638 bp upstream
Rr507292	regulatory region 507292	within coordinates
Rr507293	regulatory region 507293	1176 bp proximal
Tssr135762	transcription start site region 135762	1981 bp upstream