rs32520105 SNP Detail

Summary

• ID
  rs32520105
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:6396848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCACATTC ACCAGTTTAA
  AGTCTGGTTT AAAATACATT AAGTAGAATT GTACTTGATG GAGAGGAAAA GGCACTTAAT
  ACTGCAATTT CCAGAACATA ATTTGTCTGT CTTCCCCTCC GGTGATAATA CTGCTACACT
  GTTCGTTCAT CCACATGCAT GTCACAGCAC CTGAAAGACA TCTCTGTTAG CAGGTCAACC
  W
  AATGCAGATG TGCTGCCTGC CATAGGAGGT AATCAGCATA CCCGCGCTCC TATTATACAC
  TATGTAAAGG TTTGTTGTTG TTTTGTCAAT TCAGGGTTTT ATTTTTTTTC CTTTTTTTTA
  ATTAGGTATT TTCTTCATTT ACATTTCCAA TGCTATCCCA AAAGTCCCCC ATACCCTCCT
  CCCCACCCCC CTACCCACTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45658221	mCV22884911	ABI	CRAMUS_MOUSE	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32520105					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:6396848 () rs orientation: forward

Symbol	Name	Function Class
Nsmaf	neutral sphingomyelinase (N-SMase) activation associated factor	within coordinates
Sdcbp	syndecan binding protein	728 bp downstream
Tssr36400	transcription start site region 36400	1938 bp downstream
Tssr36401	transcription start site region 36401	1882 bp downstream