rs32521114 SNP Detail

Summary

• ID
  rs32521114
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:34525096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCATC ATCGGGTGGC TGTTGCTGTC
  K
  CAGCAAAACC CGTGCTCCCT TGACT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45158309	mCV23084321	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
ss148889171	ENSMUSSNP5708748	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss319682285	CHEV_1_34542860	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32521114					SNP	G	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:34525096 () rs orientation: forward

Symbol	Name	Function Class
4930568A12Rik	RIKEN cDNA 4930568A12 gene	within coordinates
Cpgi120	CpG island 120	within coordinates
Gm32566	predicted gene, 32566	34 bp downstream
Rr409037	regulatory region 409037	1566 bp distal
Rr409038	regulatory region 409038	1116 bp distal
Rr409039	regulatory region 409039	93 bp distal
Rr409040	regulatory region 409040	within coordinates
Rr409041	regulatory region 409041	187 bp proximal
Rr409042	regulatory region 409042	1582 bp proximal
Tssr36	transcription start site region 36	686 bp downstream
Tssr11221	transcription start site region 11221	69 bp upstream
Tssr11222	transcription start site region 11222	48 bp upstream