rs32522165 SNP Detail

Summary

• ID
  rs32522165
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:31243078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAGACAGAG ACAGAGACAG AGACAGAGAC AGCAAGCAAG
  CAGACTCTCC TCGGTAGATT TACTGACTTT CTGAAACAGC ACAGTACTGA GGGCACAAGA
  R
  CTCAGTGTCT GGAGCTGAAG GAATTTCAAT TTGCTGTCCT TTGGGGTGTG ATGGAGCAGC
  TCAGATGCGT GACTATTATC TACTTGTACT CAGTCCTTTT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss48176025	NES12108562	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32522165					SNP	G	G	G	G	G	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48176025	NES12108562	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:31243078 () rs orientation: forward

Symbol	Name	Function Class
Bdh1	3-hydroxybutyrate dehydrogenase, type 1	within coordinates
Rr514474	regulatory region 514474	1970 bp distal
Rr514475	regulatory region 514475	1860 bp distal
Rr514476	regulatory region 514476	167 bp proximal
Rr514477	regulatory region 514477	1003 bp proximal
Rr514478	regulatory region 514478	1428 bp proximal
Tssr137893	transcription start site region 137893	1982 bp downstream
Tssr137894	transcription start site region 137894	1952 bp downstream
Tssr137895	transcription start site region 137895	1913 bp downstream