rs32523510 SNP Detail

Summary

• ID
  rs32523510
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:32903911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACTGTTAA AGCTAACACT
  CCCTCTGAGC TCCAAGCCAA GCAACAGAAG CCCGGAGGGC CCTTTAAGAG GAGGGGCTAC
  AGCCTGGAGA AAAGAGGAAG AGGCCAGCAG GGGCCCTGGC CCCACCCTGT CATAGCCTCC
  TGACTGACCA AAGACTGACC GCTCCCCACT CAACACCCAG CAGAGCCACA AGGGCCCAGC
  R
  CTCTCCAGAG GATGCCTCCT GGGAGTTCAG GGACCCTGGA TCCTCAGCAT CTGGCTGGCT
  TCTGGCTTCA GCCCTTGTCA TCAACCCTAC AAGACAGAGG CCTTGTAAGG ACTGTCTTCT
  TCACTCCAAA GCTACTTCCG GCATCCCCTC CAGAAGTTCT ACAGATGCAG TAATCCTTAC
  AATTTCTTCC TACACCTGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	MOLF/EiJ
ss47677067	NES10272718	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	MOLF/EiJ
rs32523510					SNP	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47677067	NES10272718	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:32903911 () rs orientation: forward

Symbol	Name	Function Class
Gm71279	predicted gene, 71279	within coordinates
Pisd	phosphatidylserine decarboxylase	within coordinates
Rr609420	regulatory region 609420	266 bp distal
Rr609421	regulatory region 609421	73 bp distal
Rr609422	regulatory region 609422	within coordinates
Rr609423	regulatory region 609423	1026 bp proximal
Rr609424	regulatory region 609424	1264 bp proximal
Rr609425	regulatory region 609425	1528 bp proximal
Tssr45794	transcription start site region 45794	443 bp downstream
Tssr45795	transcription start site region 45795	18 bp downstream
Tssr50589	transcription start site region 50589	254 bp upstream
Tssr50590	transcription start site region 50590	226 bp upstream
Tssr50591	transcription start site region 50591	215 bp upstream