rs32524455 SNP Detail

Summary

• ID
  rs32524455
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:32903323 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCATCCATT CCTTGCCCTC
  TGAGGTTAAG TCTACAAGGA TGCTTCCCTC TACCAGGCTG AGGCAGCACA GGAGAAATGC
  ATGCTGGGAG CCCAGGGCCA CCCCCAATGC CTGCCTGTAC TTCCCACACT TCCCAGCATC
  TTGCTCACTT CCCTCACTTC CTGCCCAGCC TTTTGGGGAC TAGAGAAGCT ATAGGATGTG
  R
  AGGAAATGAG CTCAGGGAGA CCAAGTGCGG GGGCGGGGGG GGGGGGCGGG GGGGGTTCCC
  TGGGGGGGGC GCAGGAGAGC AAGACCACCC AAGGGATTTC CCAGGCCCTA ACTATGAAAG
  AGCCAACTAC ATGTGCTAGA AGGCACTCCC ACCCAGACCT CCCAGCCTCA GGACAGGGAA
  GGAAAAGAGC CCTGAAAAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss47677073	NES10272714	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs32524455					SNP	A	A	A	A	A	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47677073	NES10272714	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:32903323 () rs orientation: forward

Symbol	Name	Function Class
Gm71279	predicted gene, 71279	505 bp upstream
Pisd	phosphatidylserine decarboxylase	within coordinates
Tssr45794	transcription start site region 45794	140 bp upstream
Tssr45795	transcription start site region 45795	542 bp upstream
Tssr50589	transcription start site region 50589	293 bp downstream
Tssr50590	transcription start site region 50590	338 bp downstream
Tssr50591	transcription start site region 50591	364 bp downstream