rs32526946 SNP Detail

Summary

• ID
  rs32526946
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:126292431 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATCTCCTG ATCCCTGTCT
  TTAAAACAAA TTTTGCTACT GTATATTAAC TGTACAGAAT AATAGGTTGC ATTGATATTC
  TCCTACCTGT GTAATATATT TTGACATTAC TTATTATAAT CACCCCTCCC CCTTCTTTTT
  GGTCTTTTTC ATTCCAAATA GTTCTCTTCC CACTTTCTCT AAATTCCAAA TGAGAGAAAA
  S
  TTGAGCTATT TGTCTGTTAT ATCACTTAAC ATGATGATGT CCAGTTCCAT CCACTTTCTC
  ATAACTGGTA TAATTTTACT CATCGTTGTG GCTGAATCAA ACTGCAATGG CAGGAGAGGC
  ACTTCAGTCA TCTGGGCTCA GAACAGTTTG TAACTCCCAT TCCAAGGGGT CTGGCGCCCT
  CTTCTGACCT CTACAAGTAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46155960	mCV23683970	ABI	CRAMUS_MOUSE	f	SNP	G	C	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32526946					SNP	G	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126292431 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi19704	CpG island 19704			471 bp distal
Rr400629	regulatory region 400629			122 bp upstream
Rr400630	regulatory region 400630			1974 bp upstream
Rr655564	regulatory region 655564			within coordinates
Rr655565	regulatory region 655565			171 bp proximal
Rr655566	regulatory region 655566			347 bp proximal
Rr655567	regulatory region 655567			1667 bp proximal
Rr655568	regulatory region 655568			1687 bp proximal
Rr655569	regulatory region 655569			1995 bp proximal
Slx1b	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)			Intron
				Noncoding-Transcript-Variant