rs32527422 SNP Detail

Summary

• ID
  rs32527422
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:74026637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgtgtgtgt gtgtgtgtgt gtgtgttgct
  agagattaga cctggggtct cctgcatgct aagcagtcaa cagactgagc cacataggca
  gctccAGAAA CCTCCCAGTT CTTCTAATAA AAATCTTGCT GCCGGAACAG AAGGGGACTG
  R
  GCCATCTCGT TTCTTTCTAG CAGAGACAGA AAGCCAGGTC CAGAAAGAGT TGTGACACAC
  ATCAAGATCA CATAAATCAG GGAATGGGAG AGGGAAGGAA AGAAGGAAAG TCTAGACTTT
  GAAGCATCTC CAAACCACAG GTCAGTCCTC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss45158594	mCV23137740	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss144681615	ENSMUSSNP2494784	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss319793229	CHEV_1_74034052	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs32527422					SNP	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:74026637 () rs orientation: forward

Symbol	Name	Function Class
Rr17341	regulatory region 17341	437 bp distal
Rr27623	regulatory region 27623	461 bp distal
Rr34548	regulatory region 34548	within coordinates
Tns1	tensin 1	within coordinates
Tssr12229	transcription start site region 12229	676 bp upstream