rs32529244 SNP Detail

Summary

• ID
  rs32529244
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:31239549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTGCTGGAA ACTGAACTCA ACCTCAGCTA CTCTCTGTAA
  GCCCTCTAAC CAGCGAGCTA CAGCCTCAGT CCAGTGGAGG CTTGAAAGGA CTTGACTCAC
  R
  CGTCTGGCAT CTTAAAAAGT CCACTCTCTA GAGGAGACCA GCTGGTAATA TTAGGAGACA
  AATTTGTATT TGATTTTGTT TATTATTTAT TTATTAATTT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48176011	NES12108793	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32529244					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48176011	NES12108793	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:31239549 () rs orientation: forward

Symbol	Name	Function Class
Bdh1	3-hydroxybutyrate dehydrogenase, type 1	1566 bp upstream
Rr514473	regulatory region 514473	916 bp distal
Rr514474	regulatory region 514474	1339 bp proximal
Rr514475	regulatory region 514475	1560 bp proximal
Tssr137893	transcription start site region 137893	1537 bp upstream
Tssr137894	transcription start site region 137894	1557 bp upstream
Tssr137895	transcription start site region 137895	1584 bp upstream
Tssr140755	transcription start site region 140755	637 bp downstream