rs32529598 SNP Detail

Summary

• ID
  rs32529598
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78134754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACCAGCCAC TTTGTAAGAG TCAGCAATCC CTGTTCCCTT
  GACCTCGAAC CTCTAATCTT CCACCTTGAC AGTGGTTTCT CTGAACTGGG TGGTTGCTGA
  Y
  ATTTGCTGGA TAGAATTCAG CGGTGCTTCT AAACACATCC AAAAGCATGG GACACCACAC
  TGAAGGCTTA CCCCACTCAG TACACTGCAG GGCTTGAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss39413989	mCV27572871	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss148180820	ENSMUSSNP5172669	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32529598					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78134754 () rs orientation: forward

Symbol	Name	Function Class
Ncf4	neutrophil cytosolic factor 4	within coordinates
Rr505231	regulatory region 505231	1683 bp distal
Rr505232	regulatory region 505232	1255 bp proximal
Rr505233	regulatory region 505233	1363 bp proximal
Tssr131902	transcription start site region 131902	61 bp upstream
Tssr131903	transcription start site region 131903	334 bp upstream