rs32531546 SNP Detail

Summary

• ID
  rs32531546
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151417794 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACCCCAGA AGGATTAAGA
  AGGGGGCTGG GCACAGCACT CCTCTCCTGT CTTCCAATGG GTGTGACCAG CTGCCTAGCT
  CCTGGCACCC TGCCTTCCCT GCACAATGGA TGCTACTTTC TGAAACTGTG AGCTGAATAA
  CCCCTCTGTC CCTAAACCAC TTTTGCCAGG TATTTTGTTA GGGCCTAGCT CAACTTTAAA
  Y
  CAACTGCCAT TTGACCTGAA TGCTTTTCTG CAAGGAGGAG AGACTATGAG GTCAAGATCC
  CCTGTTCTTT GAACCACCAA GCTTCCAGTC ACCATCCCTT AAAAGCTCAT TGCCTCAAGG
  CAGTGGCTGA CCACCAATAG ACCTGGCACA CTGGGTTCAT CATGCTCCAT GGCTTACGTG
  GCCTGTGCCC CTCAAACAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45659173	mCV24967524	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss148067999	ENSMUSSNP5115657	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32531546					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151417794 () rs orientation: forward

Symbol	Name	Function Class
Camta1	calmodulin binding transcription activator 1	within coordinates
Cpgi15370	CpG island 15370	1703 bp proximal
Rr605571	regulatory region 605571	880 bp distal