rs32535044 SNP Detail

Summary

• ID
  rs32535044
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:175459878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTGCTTCT GGCTCACAAA
  GGCTCTGGAC TTCTGGCAAT AAAAAGATCG CAAAACATCA GCATGTAGGA CAGAGAGTTC
  CGACCTGAAC AGAGGTGTTC TGGAAGCTAT GGCATCGTCT GATACTCAGG GGAAAAGAGT
  GGCTGTTATT GGCGGTGGTT TGGTGAGACT GCCCAGGCGT TTACTGCTCT TTGGGCATTT
  R
  TTTTTATTAT TATTATCTCA CTAATGATTT TTTTATTGTG TGTGGGTTGT TGATTCTGAT
  AGTTAAACCT TTTAAGGTTT AAATATATTT GCTATAAATA TGGTATTGCT TTTCACTACA
  GTTATTAATA CACACTGATC GCTGACATTT CTATGAATAC CATGTCCAGT ACTGATTATG
  TCTCTCTACC CTTCCACACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	DBA/2J	LG/J	NZW/LacJ	SM/J
ss45189125	mCV22956913	ABI	CRAMUS_MOUSE	f	SNP		G	A		A
ss46694130	NES10679162	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	A		A
ss320151892	CHEV_1_177562443	CHEVERUD	SCREENING_POP	f	SNP						G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	DBA/2J	LG/J	NZW/LacJ	SM/J
rs32535044					SNP	G	G	A	G	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46694130	NES10679162	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175459878 () rs orientation: forward

Symbol	Name	Function Class
Kmo	kynurenine 3-monooxygenase	within coordinates
Rr396618	regulatory region 396618	193 bp downstream
Tssr10313	transcription start site region 10313	334 bp downstream
Tssr10314	transcription start site region 10314	311 bp downstream
Tssr10315	transcription start site region 10315	288 bp downstream
Tssr10316	transcription start site region 10316	255 bp downstream
Tssr10317	transcription start site region 10317	218 bp downstream
Tssr10318	transcription start site region 10318	211 bp downstream
Tssr10319	transcription start site region 10319	201 bp downstream
Tssr10320	transcription start site region 10320	179 bp downstream
Tssr10321	transcription start site region 10321	161 bp downstream
Tssr10322	transcription start site region 10322	152 bp downstream
Tssr10323	transcription start site region 10323	127 bp downstream