rs32535045 SNP Detail

Summary

• ID
  rs32535045
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:175459889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCATCGTCTG ATACTCAGGG GAAAAGAGTG GCTGTTATTG
  GCGGTGGTTT GGTGAGACTG CCCAGGCGTT TACTGCTCTT TGGGCATTTA TTTTTATTAT
  Y
  ATTATCTCAC TAATGATTTT TTTATTGTGT GTGGGTTGTT GATTCTGATA GTTAAACCTT
  TTAAGGTTTA AATATATTTG CTATAAATAT GGTATTGCTT                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ
ss46694131	NES10679165	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ
rs32535045					SNP	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46694131	NES10679165	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175459889 () rs orientation: forward

Symbol	Name	Function Class
Kmo	kynurenine 3-monooxygenase	within coordinates
Rr396618	regulatory region 396618	204 bp downstream
Tssr10313	transcription start site region 10313	345 bp downstream
Tssr10314	transcription start site region 10314	322 bp downstream
Tssr10315	transcription start site region 10315	299 bp downstream
Tssr10316	transcription start site region 10316	266 bp downstream
Tssr10317	transcription start site region 10317	229 bp downstream
Tssr10318	transcription start site region 10318	222 bp downstream
Tssr10319	transcription start site region 10319	212 bp downstream
Tssr10320	transcription start site region 10320	190 bp downstream
Tssr10321	transcription start site region 10321	172 bp downstream
Tssr10322	transcription start site region 10322	163 bp downstream
Tssr10323	transcription start site region 10323	138 bp downstream