rs32535316 SNP Detail

Summary

• ID
  rs32535316
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:60630367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCAACTTTA TAAGATTGTA
  TTAGGCCAAC CTGGATAATC CAGGATCATT GCCTTATTTT AAGTTCTGCT GCTTATGAAT
  CAGAATTATA TCTCTAGTCT TAATTCTCCT CTGTCGTATA GAATGACATA CTCAGATCCA
  GGGTCTCTTT AGAGCTGCAT TATTCTGCAT GATAAAACTA ATTCTTAGGT AAAGGGAAAG
  R
  CTAAGAACCA TCTTGTGATT TTTTTTCCAG TTTCTTTCAG AGGCATGTAG TGTATAATTT
  ACAGATGGAC ACCTACAATC CTTGAAATCC CCTTTTAAGT GATTCACAGA ATGAAATCGC
  CCTAGTCAGT GTCGTATGGC TGTGAAGAGA TGCCATGTCC AAGGAAACTC TTATCTAGCA
  AATTGTTTAA TTGGGGATCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	KK/HlJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39415555	mCV22682174	ABI	CRAMUS_MOUSE	f	SNP	A	G			G	G
ss63529582	NES17015490	PERLEGEN	MM_PANEL2	f	SNP	A		G	G			G	G	G	A
ss147994468	ENSMUSSNP7116274	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	KK/HlJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32535316					SNP	A	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63529582	NES17015490	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:60630367 () rs orientation: forward

Symbol	Name	Function Class
Gm48947	predicted gene, 48947	1713 bp upstream
Rr303268	regulatory region 303268	1234 bp proximal
Rr313850	regulatory region 313850	1235 bp proximal