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rs32535816 SNP Detail
Summary
  • ID
    rs32535816
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr4:47023532 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TGGTGTCTGA CAGCCTTTCG
    TGTCCGGGCT CTGCCAGCCA CTGCAGCTCA GTCAACTGTG GACAGGGCAG GGAGGCCCAG
    AGAGGGAATG ACCTGTCCTG AGACTCCTCC CATACTCAGT GTGTCCCCAG GGCTCTCATC
    CCACAGCATT GCCAGAGGCA ATACCCAACC CTGAGGCTGA AACCACCTGA GGAGAGAGGA
    Y
    GTATGTACAT AGATTGGAGG AGCTGCAACC TTGTGGAGAG AGACCCACAA GGGAACAGGC
    AGCATGGGGA AGGCCAGAGG GCTCTCAGTC ACCAGGAGTG TGCAAACAGG CCAACTCTAA
    TGCCTGCTGG AGGAGACTTA GAGGGAATGT CATGAGGACC CTGATGACGT TCAGCATACG
    GACAAGGCTG GGGGAAGCTG                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
ss45659778 mCV25226650 ABI CRAMUS_MOUSE f SNP T C T T
ss146271004 ENSMUSSNP6222064 ENSEMBL ENSEMBL_Sanger f SNP T C T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
rs32535816 SNP T C T T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:47023532 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Anks6 ankyrin repeat and sterile alpha motif domain containing 6 within coordinates
Rr89303 regulatory region 89303 469 bp proximal
Rr94180 regulatory region 94180 269 bp proximal
Rr94181 regulatory region 94181 869 bp proximal
Rr98160 regulatory region 98160 557 bp distal
Rr98161 regulatory region 98161 122 bp distal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory