rs32535816 SNP Detail

Summary

• ID
  rs32535816
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:47023532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTGTCTGA CAGCCTTTCG
  TGTCCGGGCT CTGCCAGCCA CTGCAGCTCA GTCAACTGTG GACAGGGCAG GGAGGCCCAG
  AGAGGGAATG ACCTGTCCTG AGACTCCTCC CATACTCAGT GTGTCCCCAG GGCTCTCATC
  CCACAGCATT GCCAGAGGCA ATACCCAACC CTGAGGCTGA AACCACCTGA GGAGAGAGGA
  Y
  GTATGTACAT AGATTGGAGG AGCTGCAACC TTGTGGAGAG AGACCCACAA GGGAACAGGC
  AGCATGGGGA AGGCCAGAGG GCTCTCAGTC ACCAGGAGTG TGCAAACAGG CCAACTCTAA
  TGCCTGCTGG AGGAGACTTA GAGGGAATGT CATGAGGACC CTGATGACGT TCAGCATACG
  GACAAGGCTG GGGGAAGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45659778	mCV25226650	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss146271004	ENSMUSSNP6222064	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32535816					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:47023532 () rs orientation: forward

Symbol	Name	Function Class
Anks6	ankyrin repeat and sterile alpha motif domain containing 6	within coordinates
Rr89303	regulatory region 89303	469 bp proximal
Rr94180	regulatory region 94180	269 bp proximal
Rr94181	regulatory region 94181	869 bp proximal
Rr98160	regulatory region 98160	557 bp distal
Rr98161	regulatory region 98161	122 bp distal