rs32540436 SNP Detail

Summary

• ID
  rs32540436
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:25777115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTATTGTG TGAGAGACCA
  GCAGACAGCC TGAAACCCTA TGGGTTGCCA AAACCTCAGC CAAGAACTAT AAGACCCACG
  TCTGGCTGTG CTGCTGCAGC AGGCCCCTAA CCCCTTACTC CAGGTGAGAC TAGGTAGAGT
  GCTTTGACTG AGAGAGTCCT CACATCTGCA TCTGTGCAGA ACTGAAGGAT GCTAACGCCA
  S
  GTCCTGCTGT CAGATGCAGC TAAGTTGGCC AGCATGAGAT CAAGGAGACC ATTGACCAGA
  ATAAGCCTGG AAGAACTTGT ACTTTACTCA GTCCTGAACC TGGTATATTT GTAACCACTG
  AACCAGTGAG CTTCTTTTCC ACCTTCGAAC TTGATTATTA GAATGTGTGT GTGTGTGTGT
  GTGTGTGGTG CGTGAATTGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss39415619	mCV22644410	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C
ss51610576	NES14603647	PERLEGEN	MM_PANEL2	f	SNP					C	C	G
ss147356390	ENSMUSSNP708099	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs32540436					SNP	G	G	C	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51610576	NES14603647	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:25777115 () rs orientation: forward

Symbol	Name	Function Class
Myo10	myosin X	within coordinates
Tssr130835	transcription start site region 130835	632 bp downstream
Tssr130836	transcription start site region 130836	1090 bp upstream