rs32545929 SNP Detail

Summary

• ID
  rs32545929
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:84444904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGGCCTAAC TGGATTTGGT AAGTGGAATT TACTGGATAA
  GATTTCTTGG TCAGTCAAGA CTGCCCCTGA GAATGGCATA AATATTTTTG AGATGGGGGA
  R
  TGTAGGTAGC CCTTGGGGTG AATCACAAAG CTTTGCTGTA GACCGCCTGA ATTAAACTTG
  TAAGGATATG GGAAAGCAGC TGGTAACGGC TGTGGAGTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46158726	mCV23003966	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss145360707	ENSMUSSNP139573	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss322745611	CHEV_8_86242174	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32545929					SNP	G	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84444904 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ddx39a	DEAD box helicase 39a			Intron
				Noncoding-Transcript-Variant
Rr666293	regulatory region 666293			1952 bp distal
Rr666294	regulatory region 666294			1154 bp distal