rs32548670 SNP Detail

Summary

• ID
  rs32548670
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:175794335 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCAAGCTT AACTAGGACA
  AGAGAGATCC AGATTCCAGG AAAGGAGAGC GACACCTTGT GGTCTGAGAT CAGGTTGGAA
  GTCTGGAATA TTTGGGGTTG TAGTCAAGCT GCAAGGGAGT CTGAGGGGAG ACCAGCCTTG
  AGTTACTAAC TGTCTACTTT GGGCAAAGCA TAATACTTGT GTTTATGTCC AATATTTTGT
  R
  TGATGGGAGG GATTTGCCAT GAGAAAGGAA ATGTTCACAG AGATCCCTAC AGCTTCCCCA
  TGTTTTATGG CTAACCAATG GTGCTTCACA GAGAACTATT GGAGCTGAAG TTCAAAGCCA
  AATTTAAGTC CAGAGGCTGC ATTTCACCTT TGACCCTAAA GGCATCCTCT GCCCACTTCA
  CCCTGAACAA TGACTTCAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss46695924	NES10661126	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs32548670					SNP	A	A	A	A	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46695924	NES10661126	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175794335 () rs orientation: forward

Symbol	Name	Function Class
Pld5	phospholipase D family member 5	Intron
Rr423867	regulatory region 423867	1438 bp distal
Rr423868	regulatory region 423868	134 bp distal